Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm44335-201ENSMUST00000196879 141 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm44297-201ENSMUST00000198304 141 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm44346-201ENSMUST00000198851 141 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Herc1E9PZP8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC9.65□□□□□ -0.87
Herc1E9PZP8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.65□□□□□ -0.87
Herc1E9PZP8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Herc1E9PZP8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.64□□□□□ -0.87
Herc1E9PZP8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Herc1E9PZP8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.63□□□□□ -0.87
Herc1E9PZP8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Herc1E9PZP8 Gm44430-201ENSMUST00000203376 995 ntBASIC9.62□□□□□ -0.87
Herc1E9PZP8 AC126408.1-201ENSMUST00000225184 523 ntBASIC9.62□□□□□ -0.87
Herc1E9PZP8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 AC127302.2-201ENSMUST00000215212 268 ntBASIC9.62□□□□□ -0.87
Herc1E9PZP8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Herc1E9PZP8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms