Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col6a3E9PWQ3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col6a3E9PWQ3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Col6a3E9PWQ3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Col6a3E9PWQ3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col6a3E9PWQ3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Gm10355-201ENSMUST00000097146 517 ntBASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col6a3E9PWQ3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col6a3E9PWQ3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col6a3E9PWQ3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Col6a3E9PWQ3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms