Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Gm17661-201ENSMUST00000170317 270 ntBASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Gm9731-201ENSMUST00000209480 747 ntBASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssxa1B1AUS7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ssxa1B1AUS7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ssxa1B1AUS7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Gm27463-201ENSMUST00000183569 57 ntBASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ssxa1B1AUS7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssxa1B1AUS7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssxa1B1AUS7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
Ssxa1B1AUS7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ssxa1B1AUS7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ssxa1B1AUS7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssxa1B1AUS7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms