Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11127A7VMS2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Gm11127A7VMS2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm11127A7VMS2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11127A7VMS2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Gm10849-201ENSMUST00000100397 618 ntBASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Gm11127A7VMS2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm11127A7VMS2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Gm8495-201ENSMUST00000188740 694 ntBASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Gm7291-201ENSMUST00000199147 382 ntBASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm11127A7VMS2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms