Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd6A3KFM7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Gm13312-201ENSMUST00000119631 718 ntBASIC13.96□□□□□ -0.17
Chd6A3KFM7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.96□□□□□ -0.17
Chd6A3KFM7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Chd6A3KFM7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.96□□□□□ -0.18
Chd6A3KFM7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Gm25857-201ENSMUST00000082788 129 ntBASIC13.96□□□□□ -0.18
Chd6A3KFM7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chd6A3KFM7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.95□□□□□ -0.18
Chd6A3KFM7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.95□□□□□ -0.18
Chd6A3KFM7 Gm15590-201ENSMUST00000078419 552 ntBASIC13.95□□□□□ -0.18
Chd6A3KFM7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chd6A3KFM7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Gm12428-201ENSMUST00000119844 727 ntBASIC13.94□□□□□ -0.18
Chd6A3KFM7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Chd6A3KFM7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Gm13823-201ENSMUST00000119930 345 ntBASIC13.93□□□□□ -0.18
Chd6A3KFM7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.93□□□□□ -0.18
Chd6A3KFM7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Chd6A3KFM7 Gm13036-201ENSMUST00000117799 748 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Gm11336-201ENSMUST00000118168 334 ntBASIC13.92□□□□□ -0.18
Chd6A3KFM7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.92□□□□□ -0.18
Chd6A3KFM7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd6A3KFM7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms