Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv13-2A0A140T8N6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Mir1199-201ENSMUST00000117015 119 ntBASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.96□□□□□ -0.49
Trbv13-2A0A140T8N6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-2A0A140T8N6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-2A0A140T8N6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-2A0A140T8N6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-2A0A140T8N6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv13-2A0A140T8N6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-2A0A140T8N6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-2A0A140T8N6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms