Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13n-4A0A0G2JG01 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Mir5122-201ENSMUST00000175004 89 ntBASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13n-4A0A0G2JG01 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13n-4A0A0G2JG01 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13n-4A0A0G2JG01 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13n-4A0A0G2JG01 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13n-4A0A0G2JG01 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms