Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm11620-201ENSMUST00000118770 1845 ntBASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Igkv8-27A0A0G2JF28 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm19430-201ENSMUST00000193847 2137 ntBASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 AC137127.1-201ENSMUST00000213466 1078 ntBASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms