Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Gm11355-201ENSMUST00000121120 306 ntBASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-43A0A0A6YXN5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm10566-201ENSMUST00000086739 996 ntBASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-43A0A0A6YXN5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms