Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9d-3A0A075B695 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Trmt13-210ENSMUST00000198454 880 ntBASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav9d-3A0A075B695 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9d-3A0A075B695 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Gm11643-201ENSMUST00000119578 864 ntBASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Gm6576-201ENSMUST00000169678 883 ntBASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9d-3A0A075B695 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms