Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trdv1A0A075B657 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Gm13401-201ENSMUST00000117074 291 ntBASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdv1A0A075B657 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv1A0A075B657 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv1A0A075B657 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv1A0A075B657 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv1A0A075B657 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdv1A0A075B657 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Gm6211-202ENSMUST00000167849 925 ntBASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Gm42642-201ENSMUST00000200683 355 ntBASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdv1A0A075B657 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Gm11643-201ENSMUST00000119578 864 ntBASIC13.07□□□□□ -0.32
Trdv1A0A075B657 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.07□□□□□ -0.32
Trdv1A0A075B657 AV356131-201ENSMUST00000206201 750 ntBASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdv1A0A075B657 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trdv1A0A075B657 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms