Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav14n-3A0A075B645 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav14n-3A0A075B645 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Gm13146-201ENSMUST00000118508 780 ntBASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Gm13534-201ENSMUST00000121169 513 ntBASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Gm8493-201ENSMUST00000196881 489 ntBASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Gm29791-202ENSMUST00000207888 369 ntBASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav14n-3A0A075B645 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Gm40848-201ENSMUST00000221998 324 ntBASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Rps24-207ENSMUST00000224568 714 ntBASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav14n-3A0A075B645 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav14n-3A0A075B645 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms