Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6n-5A0A075B621 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6n-5A0A075B621 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Gm40848-201ENSMUST00000221998 324 ntBASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6n-5A0A075B621 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6n-5A0A075B621 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav6n-5A0A075B621 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms