Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13d-1A0A075B606 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm10418-201ENSMUST00000100943 576 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm6433-201ENSMUST00000118634 875 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm7977-201ENSMUST00000193787 748 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm3375-201ENSMUST00000203929 796 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Tgds-204ENSMUST00000228543 1594 ntBASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13d-1A0A075B606 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Gm12085-201ENSMUST00000119263 940 ntBASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav13d-1A0A075B606 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13d-1A0A075B606 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.58□□□□□ -0.39
Trav13d-1A0A075B606 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Trav13d-1A0A075B606 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav13d-1A0A075B606 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav13d-1A0A075B606 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav13d-1A0A075B606 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms