Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm25269-201ENSMUST00000122601 104 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm26001-201ENSMUST00000157989 103 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm22314-201ENSMUST00000158007 281 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm22650-201ENSMUST00000175138 105 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm37421-201ENSMUST00000193088 132 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm43304-201ENSMUST00000196803 326 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm17775-201ENSMUST00000198542 258 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm24166-201ENSMUST00000082724 135 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Snord15b-201ENSMUST00000083032 145 ntBASIC4.77□□□□□ -1.65
Nubp1Q9R060 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Nubp1Q9R060 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm11366-201ENSMUST00000119279 429 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm12884-201ENSMUST00000120371 325 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm22725-201ENSMUST00000158092 110 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Mir1947-201ENSMUST00000158235 85 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm24053-201ENSMUST00000158620 105 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm2862-201ENSMUST00000161524 328 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm24304-201ENSMUST00000177635 107 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.76□□□□□ -1.65
Nubp1Q9R060 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Nubp1Q9R060 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm13149-201ENSMUST00000122071 339 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm27952-201ENSMUST00000184748 105 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm44259-201ENSMUST00000204996 298 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Gm24616-201ENSMUST00000083274 139 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nubp1Q9R060 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Nubp1Q9R060 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.75□□□□□ -1.65
Nubp1Q9R060 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Nubp1Q9R060 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm24125-201ENSMUST00000104105 137 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm15282-201ENSMUST00000117707 300 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm12427-201ENSMUST00000117719 302 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm3267-201ENSMUST00000118671 473 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm13797-201ENSMUST00000121792 120 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm23536-201ENSMUST00000157541 134 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm22789-201ENSMUST00000157884 130 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm24959-201ENSMUST00000157924 146 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Mir6418-201ENSMUST00000185075 115 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm29489-201ENSMUST00000188934 324 ntBASIC4.74□□□□□ -1.65
Nubp1Q9R060 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Nubp1Q9R060 Gm29736-201ENSMUST00000198189 385 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms