Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm19790-201ENSMUST00000214414 251 ntBASIC4.56□□□□□ -1.68
Sox1P53783 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.56□□□□□ -1.68
Sox1P53783 Gm5899-201ENSMUST00000071770 270 ntBASIC4.56□□□□□ -1.68
Sox1P53783 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sox1P53783 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.56□□□□□ -1.68
Sox1P53783 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sox1P53783 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sox1P53783 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sox1P53783 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sox1P53783 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sox1P53783 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sox1P53783 Gm12125-201ENSMUST00000117261 736 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm14971-201ENSMUST00000117980 663 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm15760-201ENSMUST00000119553 283 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm13273-201ENSMUST00000119737 159 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm23667-201ENSMUST00000157466 120 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm26404-201ENSMUST00000158498 109 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Gm24487-201ENSMUST00000178017 63 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Mir7661-201ENSMUST00000197023 61 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.55□□□□□ -1.68
Sox1P53783 Gm8820-201ENSMUST00000204077 571 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm45498-201ENSMUST00000210346 283 ntBASIC4.55□□□□□ -1.68
Sox1P53783 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm16419-201ENSMUST00000221057 625 ntBASIC4.55□□□□□ -1.68
Sox1P53783 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm23041-201ENSMUST00000083868 106 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Sox1P53783 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sox1P53783 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
Sox1P53783 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Sox1P53783 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sox1P53783 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sox1P53783 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sox1P53783 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.55□□□□□ -1.68
Sox1P53783 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.55□□□□□ -1.68
Sox1P53783 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Mir673-201ENSMUST00000102361 91 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Gm22320-201ENSMUST00000157149 312 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Mir7081-201ENSMUST00000184490 75 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Gm44054-201ENSMUST00000203814 372 ntBASIC4.54□□□□□ -1.68
Sox1P53783 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.54□□□□□ -1.68
Sox1P53783 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.54□□□□□ -1.68
Sox1P53783 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Gm10916-201ENSMUST00000080330 483 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Gm26121-201ENSMUST00000083364 162 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.54□□□□□ -1.68
Sox1P53783 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox1P53783 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox1P53783 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox1P53783 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox1P53783 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox1P53783 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Sox1P53783 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox1P53783 Gm14973-201ENSMUST00000117248 255 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm12039-201ENSMUST00000118219 180 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm12417-201ENSMUST00000119153 403 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm15244-201ENSMUST00000121122 130 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm14559-201ENSMUST00000121745 496 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm8200-201ENSMUST00000122390 222 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox1P53783 Gm6265-201ENSMUST00000149263 231 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm25283-201ENSMUST00000157272 77 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.53□□□□□ -1.68
Sox1P53783 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.53□□□□□ -1.68
Sox1P53783 Gm37089-201ENSMUST00000195616 129 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms