Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 FDPSP5-201ENST00000399474 1057 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AL359694.1-201ENST00000403247 604 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 MIR1266-201ENST00000408125 84 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AC234771.4-201ENST00000441416 730 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 CEACAMP5-201ENST00000448037 961 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 NPM1P9-201ENST00000453156 844 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RPL26P30-201ENST00000453533 435 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RPL7AP23-201ENST00000482625 776 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AC074386.1-206ENST00000487102 761 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RN7SL37P-201ENST00000490461 307 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RN7SKP196-201ENST00000516267 345 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 OR4C49P-201ENST00000563891 900 ntBASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf40Q8IXQ3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC010132.4-201ENST00000569883 1368 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 RNU1-5P-201ENST00000362684 144 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC026310.1-201ENST00000396004 378 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 RPL36P18-201ENST00000419316 318 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 FABP5P1-201ENST00000423401 411 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 FABP5P2-201ENST00000439042 408 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 SNRPBP1-201ENST00000443634 282 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 RPS4XP17-201ENST00000479057 754 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC139713.1-202ENST00000512366 460 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC027667.1-201ENST00000545814 304 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL445383.1-201ENST00000554689 874 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC091304.4-201ENST00000565703 620 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC004232.1-201ENST00000571388 208 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC010333.3-201ENST00000615100 402 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL354718.1-201ENST00000619764 589 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC005514.1-201ENST00000623521 208 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC135068.11-201ENST00000636378 921 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC127070.3-201ENST00000503695 3263 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC022507.1-201ENST00000548349 1505 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 AC011592.1-201ENST00000624647 3634 ntBASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf40Q8IXQ3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms