Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.08□□□□□ -1.6
Cln3Q61124 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cln3Q61124 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cln3Q61124 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cln3Q61124 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Cln3Q61124 Gm22758-201ENSMUST00000102275 96 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Gm22936-201ENSMUST00000103955 126 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Gm15313-201ENSMUST00000119179 282 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Gm15493-201ENSMUST00000119461 528 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Defa-ps8-201ENSMUST00000120972 279 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Gm17100-201ENSMUST00000168963 272 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cln3Q61124 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.07□□□□□ -1.6
Cln3Q61124 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Cln3Q61124 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Cln3Q61124 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Cln3Q61124 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Cln3Q61124 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Gm14894-201ENSMUST00000117170 270 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm11432-201ENSMUST00000117334 231 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm13210-201ENSMUST00000121483 273 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm15065-201ENSMUST00000121699 273 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm25863-201ENSMUST00000158249 329 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Gm27896-201ENSMUST00000175162 317 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Mir669k-201ENSMUST00000177742 127 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm22367-201ENSMUST00000178930 132 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm25673-201ENSMUST00000179957 127 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC5.06□□□□□ -1.6
Cln3Q61124 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Gm37449-201ENSMUST00000193016 270 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm30341-201ENSMUST00000194363 289 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm18658-201ENSMUST00000195558 270 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm42428-201ENSMUST00000198677 302 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Gm44054-201ENSMUST00000203814 372 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC5.06□□□□□ -1.6
Cln3Q61124 AC165293.1-201ENSMUST00000219669 329 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.06□□□□□ -1.6
Cln3Q61124 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm25698-201ENSMUST00000082897 107 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm25411-201ENSMUST00000083760 151 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cln3Q61124 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cln3Q61124 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.06□□□□□ -1.6
Cln3Q61124 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cln3Q61124 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cln3Q61124 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cln3Q61124 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cln3Q61124 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Cln3Q61124 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cln3Q61124 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cln3Q61124 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cln3Q61124 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Cln3Q61124 Gm13504-201ENSMUST00000117490 316 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Gm12683-201ENSMUST00000117528 415 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Gm11971-201ENSMUST00000117715 288 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Gm22611-201ENSMUST00000158288 150 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Gm42647-201ENSMUST00000195939 459 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Mir376a-201ENSMUST00000197584 68 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC5.05□□□□□ -1.6
Cln3Q61124 CT010449.1-201ENSMUST00000220624 153 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cln3Q61124 Gm25815-201ENSMUST00000082755 107 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Mir302d-201ENSMUST00000083513 66 ntBASIC5.05□□□□□ -1.6
Cln3Q61124 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Cln3Q61124 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.05□□□□□ -1.6
Cln3Q61124 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Cln3Q61124 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.04□□□□□ -1.6
Cln3Q61124 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.04□□□□□ -1.6
Cln3Q61124 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Cln3Q61124 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Cln3Q61124 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.04□□□□□ -1.6
Cln3Q61124 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Cln3Q61124 Gm23472-201ENSMUST00000101806 191 ntBASIC5.04□□□□□ -1.6
Cln3Q61124 Mir466p-201ENSMUST00000103925 89 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms