Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC005517.1-201ENST00000452091 489 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 MYL6P4-201ENST00000477911 453 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 AL591122.1-201ENST00000487348 492 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 SIGLEC31P-201ENST00000594237 551 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 COX6CP16-201ENST00000603667 216 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 AL078624.2-201ENST00000605063 554 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 MIR6883-201ENST00000614952 78 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 RN7SL126P-201ENST00000616400 299 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 AP005212.3-201ENST00000619964 528 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMBP28068 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DMBP28068 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMBP28068 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.21□□□□□ -1.58
HLA-DMBP28068 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMBP28068 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DMBP28068 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC062029.1-202ENST00000606164 3651 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 RNA5SP302-201ENST00000364896 100 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL139100.1-201ENST00000408001 498 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 VDAC1P10-201ENST00000416715 891 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC134879.1-201ENST00000426062 394 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ANXA2P2-201ENST00000435128 1020 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 TREML3P-201ENST00000457327 501 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC083806.1-201ENST00000468934 316 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 RN7SL379P-201ENST00000479912 293 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC025271.1-201ENST00000485045 429 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC017007.1-201ENST00000511960 415 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC011352.2-201ENST00000514574 1016 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 NXPE2P1-201ENST00000543705 726 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL031846.1-201ENST00000560933 314 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 MIR5095-201ENST00000578844 88 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 MIR8082-201ENST00000612488 81 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC009283.1-201ENST00000615852 645 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL161420.1-201ENST00000619393 264 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AL356585.10-201ENST00000641883 123 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms