Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27254-201ENSMUST00000183926 517 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm27952-201ENSMUST00000184748 105 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm28920-201ENSMUST00000189957 699 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm25401-201ENSMUST00000082975 106 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 Gm650-201ENSMUST00000144428 1551 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Clp1Q99LI9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.9□□□□□ -1.63
Clp1Q99LI9 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Mir875-201ENSMUST00000104698 78 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm12427-201ENSMUST00000117719 302 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm13457-201ENSMUST00000117885 267 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm14541-201ENSMUST00000118985 157 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm14581-201ENSMUST00000121726 198 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm12956-201ENSMUST00000122184 414 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm24909-201ENSMUST00000157290 280 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm16378-201ENSMUST00000179168 342 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm28304-201ENSMUST00000185977 312 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm29256-201ENSMUST00000189094 312 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm28484-201ENSMUST00000190606 312 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm37746-201ENSMUST00000193249 198 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm2522-201ENSMUST00000204280 322 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm45150-201ENSMUST00000206051 467 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm44853-201ENSMUST00000209070 250 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm45392-201ENSMUST00000210441 214 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Clp1Q99LI9 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.89□□□□□ -1.63
Clp1Q99LI9 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm13343-201ENSMUST00000116474 105 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm23902-201ENSMUST00000157571 134 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Mir5710-201ENSMUST00000176884 69 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm28724-202ENSMUST00000194218 295 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm43855-201ENSMUST00000197462 507 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm8069-201ENSMUST00000197887 154 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm44844-201ENSMUST00000207242 336 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.88□□□□□ -1.63
Clp1Q99LI9 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Clp1Q99LI9 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm24338-201ENSMUST00000104205 127 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm15151-201ENSMUST00000117106 177 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm12982-201ENSMUST00000117408 190 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm15012-201ENSMUST00000119176 106 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.87□□□□□ -1.63
Clp1Q99LI9 Gm13967-201ENSMUST00000120404 380 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms