Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC026108.1-201ENST00000635444 547 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AC092821.2-201ENST00000545710 2042 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 AL358913.2-201ENST00000553881 1548 ntBASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
CHMP4CQ96CF2 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 NCOA4P3-201ENST00000513203 1877 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC015871.3-201ENST00000618835 2261 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ENO1P4-201ENST00000416471 1785 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 CR383656.5-201ENST00000547616 1340 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC022819.1-201ENST00000563495 3910 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC006511.2-201ENST00000388966 660 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 MRPL32P1-201ENST00000406301 247 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AL133480.2-201ENST00000456723 487 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 MTND3P6-201ENST00000485242 339 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AL079303.1-201ENST00000486611 463 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC096661.1-201ENST00000515870 822 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 SCARNA18.2-201ENST00000516882 84 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 MIR4428-201ENST00000584884 73 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC022001.1-201ENST00000605193 268 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AC004943.1-203ENST00000624370 1074 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 AL049541.2-201ENST00000626377 555 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 TMEM14EP-202ENST00000639378 1296 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 BRD7P6-201ENST00000431406 1860 ntBASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.38□□□□□ -1.07
CHMP4CQ96CF2 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AC079949.2-201ENST00000617117 2933 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AC009831.5-201ENST00000624000 3189 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 MIR187-201ENST00000385062 109 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 PDCL3P5-201ENST00000398028 722 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RPS7P4-201ENST00000444127 582 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 WBP1LP1-201ENST00000460451 896 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 MYL6P4-201ENST00000477911 453 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RN7SL705P-201ENST00000481678 294 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RPL12P7-201ENST00000493832 494 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RN7SL775P-201ENST00000498361 336 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 RNA5SP518-201ENST00000515957 119 ntBASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.37□□□□□ -1.07
CHMP4CQ96CF2 AC091932.1-201ENST00000569381 427 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms