Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25615-201ENSMUST00000177836 94 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm28344-201ENSMUST00000185704 279 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm29774-201ENSMUST00000219270 436 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 AC121942.2-201ENSMUST00000223824 600 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm23300-201ENSMUST00000082712 125 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Mir667-201ENSMUST00000102441 92 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm14770-201ENSMUST00000122197 312 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm23171-201ENSMUST00000157159 264 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm25716-201ENSMUST00000158628 104 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm24949-201ENSMUST00000183609 215 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm27690-201ENSMUST00000184596 126 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm27608-201ENSMUST00000184822 162 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm37682-201ENSMUST00000191776 522 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm37030-201ENSMUST00000194254 295 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm42453-201ENSMUST00000200477 409 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm44520-201ENSMUST00000205447 802 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm44844-201ENSMUST00000207242 336 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm30674-201ENSMUST00000214523 392 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 AC154276.2-201ENSMUST00000227707 309 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Snord59a-201ENSMUST00000082844 74 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm23455-201ENSMUST00000083331 100 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm10351-201ENSMUST00000087694 125 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gm37788-201ENSMUST00000193958 2705 ntBASIC5.25□□□□□ -1.57
Trim47Q8C0E3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm23594-201ENSMUST00000104307 134 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm23608-201ENSMUST00000104545 128 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm13714-201ENSMUST00000117313 221 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm15745-201ENSMUST00000119807 115 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm13581-201ENSMUST00000120675 278 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm25427-201ENSMUST00000157605 103 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Mir7022-201ENSMUST00000183749 61 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm27387-201ENSMUST00000184583 116 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Mir6899-201ENSMUST00000184798 64 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Mir6540-201ENSMUST00000184886 108 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm44391-201ENSMUST00000198490 93 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 AC165293.1-201ENSMUST00000219669 329 ntBASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim47Q8C0E3 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Mir466p-201ENSMUST00000103925 89 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm24987-201ENSMUST00000104453 134 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm13457-201ENSMUST00000117885 267 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm24251-201ENSMUST00000157324 114 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm24113-201ENSMUST00000157477 276 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm22769-201ENSMUST00000158367 98 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm16114-201ENSMUST00000161930 300 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm25020-201ENSMUST00000178071 107 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm29022-201ENSMUST00000190702 225 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim47Q8C0E3 Gm43193-201ENSMUST00000197732 441 ntBASIC5.23□□□□□ -1.57
Trim47Q8C0E3 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms