Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Sh3rf1Q69ZI1 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Mir541-201ENSMUST00000102097 90 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm11490-201ENSMUST00000118128 272 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm14688-201ENSMUST00000119169 303 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm13901-201ENSMUST00000137252 468 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm22257-201ENSMUST00000158687 301 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm16326-201ENSMUST00000162843 414 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm22859-201ENSMUST00000174978 122 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm21850-201ENSMUST00000179792 359 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Mir7022-201ENSMUST00000183749 61 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Mir6899-201ENSMUST00000184798 64 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm32340-201ENSMUST00000192883 259 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm8242-202ENSMUST00000193056 475 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm34073-201ENSMUST00000195736 212 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm18213-201ENSMUST00000207850 178 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm5265-201ENSMUST00000076828 342 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm23741-201ENSMUST00000097237 171 ntBASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm12417-201ENSMUST00000119153 403 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm24630-201ENSMUST00000122768 106 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Mir6346-201ENSMUST00000183982 81 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm27421-201ENSMUST00000184729 167 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm27286-201ENSMUST00000184934 179 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37878-201ENSMUST00000192108 387 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm38076-201ENSMUST00000193889 450 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm20144-201ENSMUST00000203031 165 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm43925-201ENSMUST00000203498 206 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm45007-201ENSMUST00000206237 366 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm29884-201ENSMUST00000218403 453 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm25812-201ENSMUST00000082751 103 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.56□□□□□ -1.68
Sh3rf1Q69ZI1 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm7853-201ENSMUST00000100708 478 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm25875-201ENSMUST00000104323 107 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm25560-201ENSMUST00000104606 176 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm13386-201ENSMUST00000117677 124 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm13903-201ENSMUST00000120945 193 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm23000-201ENSMUST00000157083 139 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm25427-201ENSMUST00000157605 103 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm24507-201ENSMUST00000157683 134 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm24085-201ENSMUST00000175172 116 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Trbv11-201ENSMUST00000194354 260 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm37732-201ENSMUST00000194377 316 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm7407-201ENSMUST00000208301 568 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm23300-201ENSMUST00000082712 125 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Sh3rf1Q69ZI1 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sh3rf1Q69ZI1 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Sh3rf1Q69ZI1 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.54□□□□□ -1.68
Sh3rf1Q69ZI1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sh3rf1Q69ZI1 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sh3rf1Q69ZI1 Mir592-201ENSMUST00000102113 96 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms