Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cacna1bO55017 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm11890-201ENSMUST00000119585 417 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm5937-201ENSMUST00000119715 643 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm11876-201ENSMUST00000120002 269 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm13487-201ENSMUST00000122240 864 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm22228-201ENSMUST00000157364 101 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm27656-201ENSMUST00000185055 80 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.7□□□□□ -2.14
Cacna1bO55017 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm26371-201ENSMUST00000157829 104 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Cacna1bO55017 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm37934-201ENSMUST00000192902 402 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm37676-201ENSMUST00000195496 507 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm42967-201ENSMUST00000198647 2312 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm12515-201ENSMUST00000120116 361 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm11965-201ENSMUST00000122017 277 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm24475-201ENSMUST00000157435 143 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Mir7052-201ENSMUST00000184821 65 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm38238-201ENSMUST00000194334 346 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm44059-201ENSMUST00000204048 351 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm45034-201ENSMUST00000206831 482 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm19599-201ENSMUST00000218898 358 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Gm17872-201ENSMUST00000222550 532 ntBASIC1.69□□□□□ -2.14
Cacna1bO55017 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Cacna1bO55017 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cacna1bO55017 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Cacna1bO55017 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm15488-201ENSMUST00000121682 670 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Mir3473a-201ENSMUST00000175011 78 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm24572-201ENSMUST00000175505 88 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm27245-201ENSMUST00000184385 376 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm18540-201ENSMUST00000204025 526 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.68□□□□□ -2.14
Cacna1bO55017 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cacna1bO55017 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm22083-201ENSMUST00000157586 102 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm25432-201ENSMUST00000158284 66 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm5309-201ENSMUST00000197416 677 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cacna1bO55017 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cacna1bO55017 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm25005-201ENSMUST00000083812 156 ntBASIC1.68□□□□□ -2.14
Cacna1bO55017 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cacna1bO55017 Gm11356-201ENSMUST00000118974 192 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm14541-201ENSMUST00000118985 157 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm14927-201ENSMUST00000120283 454 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm14905-201ENSMUST00000122351 639 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm8988-201ENSMUST00000155015 1240 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm23783-201ENSMUST00000157941 102 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cacna1bO55017 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm27580-201ENSMUST00000183666 149 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm22897-201ENSMUST00000197860 128 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm18747-201ENSMUST00000198129 648 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 AC158142.3-201ENSMUST00000226230 675 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Cacna1bO55017 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cacna1bO55017 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.67□□□□□ -2.14
Cacna1bO55017 Gm6913-201ENSMUST00000100019 348 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms