Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm35405-201ENSMUST00000218754 400 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Gm2446-201ENSMUST00000220144 772 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Gm46312-201ENSMUST00000220961 420 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cldn4O35054 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cldn4O35054 Gm9845-201ENSMUST00000056409 598 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Gm25581-201ENSMUST00000083410 164 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.36□□□□□ -1.87
Cldn4O35054 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cldn4O35054 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Cldn4O35054 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldn4O35054 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm13167-201ENSMUST00000118554 578 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm13155-201ENSMUST00000119277 646 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm14570-201ENSMUST00000119444 391 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm11512-201ENSMUST00000119669 663 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm14815-201ENSMUST00000120060 488 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm8178-201ENSMUST00000121570 646 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm14362-201ENSMUST00000121679 273 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm15254-201ENSMUST00000149567 273 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm23234-201ENSMUST00000157304 134 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm25670-201ENSMUST00000178423 107 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm26239-201ENSMUST00000178842 107 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm24267-201ENSMUST00000179841 107 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm29104-201ENSMUST00000186304 222 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm28404-201ENSMUST00000190242 453 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm43407-201ENSMUST00000199816 317 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm3442-201ENSMUST00000216808 710 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Gm5175-202ENSMUST00000219699 529 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cldn4O35054 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Cldn4O35054 Gm24292-201ENSMUST00000082888 107 ntBASIC3.35□□□□□ -1.87
Cldn4O35054 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cldn4O35054 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cldn4O35054 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cldn4O35054 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Cldn4O35054 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cldn4O35054 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
Cldn4O35054 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cldn4O35054 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm24120-201ENSMUST00000103978 129 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm14240-201ENSMUST00000120353 546 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm15177-201ENSMUST00000120491 577 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm12819-201ENSMUST00000122223 629 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm6265-201ENSMUST00000149263 231 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.34□□□□□ -1.87
Cldn4O35054 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Cldn4O35054 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm8151-201ENSMUST00000184817 871 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm36984-201ENSMUST00000192770 235 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm37817-201ENSMUST00000195276 434 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm43541-201ENSMUST00000197208 581 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm44353-201ENSMUST00000200618 138 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm43026-201ENSMUST00000202972 325 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm44923-201ENSMUST00000206673 85 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm44754-201ENSMUST00000208155 400 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm8423-201ENSMUST00000211387 607 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 Gm19441-201ENSMUST00000221545 330 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Cldn4O35054 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.34□□□□□ -1.87
Cldn4O35054 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cldn4O35054 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.34□□□□□ -1.88
Cldn4O35054 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldn4O35054 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Cldn4O35054 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn4O35054 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn4O35054 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms