Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm26121-201ENSMUST00000083364 162 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Mir28a-201ENSMUST00000083560 86 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.99□□□□□ -1.77
Pcdh1F7BJK1 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm25096-201ENSMUST00000104043 129 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm22498-201ENSMUST00000104497 86 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm22676-201ENSMUST00000116972 129 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm13550-201ENSMUST00000118185 525 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm12647-201ENSMUST00000118977 265 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm14586-201ENSMUST00000119571 408 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm13213-201ENSMUST00000119668 474 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm13273-201ENSMUST00000119737 159 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm14656-201ENSMUST00000120342 502 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm12686-201ENSMUST00000120546 397 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm12956-201ENSMUST00000122184 414 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm27926-201ENSMUST00000157180 66 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm22870-201ENSMUST00000157501 112 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm23781-201ENSMUST00000157940 308 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm22312-201ENSMUST00000158005 130 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm20534-201ENSMUST00000172957 172 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm7958-201ENSMUST00000178255 468 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm7950-201ENSMUST00000179633 468 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm21850-201ENSMUST00000179792 359 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Mir6372-201ENSMUST00000185114 109 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm28534-201ENSMUST00000187744 676 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm28288-201ENSMUST00000191019 214 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm44474-201ENSMUST00000196525 127 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm43309-201ENSMUST00000200837 458 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm23678-201ENSMUST00000083157 107 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm23461-201ENSMUST00000083265 107 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm26329-201ENSMUST00000093723 110 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Pcdh1F7BJK1 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Synpr-207ENSMUST00000223583 3362 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm23142-201ENSMUST00000101848 105 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm26240-201ENSMUST00000101893 105 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm12191-201ENSMUST00000118307 348 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm9703-201ENSMUST00000119573 343 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm12042-201ENSMUST00000120479 301 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm13903-201ENSMUST00000120945 193 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm13149-201ENSMUST00000122071 339 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24596-201ENSMUST00000122504 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm23137-201ENSMUST00000157559 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24584-201ENSMUST00000157972 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm6374-201ENSMUST00000159051 788 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24085-201ENSMUST00000175172 116 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm25211-201ENSMUST00000177553 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24540-201ENSMUST00000177627 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm25256-201ENSMUST00000177746 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm22822-201ENSMUST00000177941 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Rnu6-201ENSMUST00000178023 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm23151-201ENSMUST00000178061 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm23402-201ENSMUST00000178130 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm25245-201ENSMUST00000178139 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24753-201ENSMUST00000178183 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm25829-201ENSMUST00000178275 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm22092-201ENSMUST00000178290 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm24486-201ENSMUST00000178420 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm23217-201ENSMUST00000178482 107 ntBASIC3.97□□□□□ -1.77
Pcdh1F7BJK1 Gm26245-201ENSMUST00000178491 107 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms