Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm17186-201ENSMUST00000171742 456 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm7094-201ENSMUST00000178379 366 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm29281-201ENSMUST00000188077 381 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm26352-201ENSMUST00000158223 125 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Gm43201-201ENSMUST00000195925 3416 ntBASIC1.46□□□□□ -2.18
Col6a6Q8C6K9 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm26473-201ENSMUST00000116763 127 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm23760-201ENSMUST00000158350 116 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm27733-201ENSMUST00000184803 68 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm28744-201ENSMUST00000189939 340 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm43406-201ENSMUST00000200356 334 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm10088-201ENSMUST00000074116 423 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm42671-201ENSMUST00000198013 1604 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm27155-201ENSMUST00000183716 898 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm29658-201ENSMUST00000185404 230 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm43723-201ENSMUST00000196886 189 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm45063-201ENSMUST00000203726 472 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Gm44555-201ENSMUST00000209008 148 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Col6a6Q8C6K9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm13409-201ENSMUST00000122072 546 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Mir1927-201ENSMUST00000158579 109 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm24666-201ENSMUST00000158937 167 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm5929-201ENSMUST00000166883 487 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm26652-202ENSMUST00000181672 475 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Gm18341-201ENSMUST00000197538 622 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 CT025525.1-201ENSMUST00000226325 1054 ntBASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Col6a6Q8C6K9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm25728-201ENSMUST00000104525 159 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm15106-201ENSMUST00000119691 821 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm2855-201ENSMUST00000166765 456 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm22254-201ENSMUST00000179186 110 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm20304-201ENSMUST00000218168 444 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Mir448-201ENSMUST00000083516 112 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm12512-201ENSMUST00000119620 217 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm9785-202ENSMUST00000144563 593 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm23470-201ENSMUST00000157129 120 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm43193-201ENSMUST00000197732 441 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Mir7232-201ENSMUST00000197929 74 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Gm25755-201ENSMUST00000083396 107 ntBASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col6a6Q8C6K9 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Gm649-201ENSMUST00000117284 1054 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Gm22228-201ENSMUST00000157364 101 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Gm3851-201ENSMUST00000168653 318 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col6a6Q8C6K9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms