Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a1Q04857 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm12760-201ENSMUST00000117861 482 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm12893-201ENSMUST00000121732 275 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm9003-201ENSMUST00000121810 482 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm23120-201ENSMUST00000157654 287 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm24501-201ENSMUST00000158452 62 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm23860-201ENSMUST00000179446 132 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm28255-201ENSMUST00000187101 694 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm29668-201ENSMUST00000187802 315 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Gm10916-201ENSMUST00000080330 483 ntBASIC4.86□□□□□ -1.63
Col6a1Q04857 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col6a1Q04857 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a1Q04857 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm14868-201ENSMUST00000117840 216 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm2066-201ENSMUST00000118046 389 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm12495-201ENSMUST00000119750 447 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm14298-201ENSMUST00000139032 237 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm16356-201ENSMUST00000143300 169 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm22849-201ENSMUST00000157713 307 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm24858-201ENSMUST00000158058 323 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm24968-201ENSMUST00000179817 107 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm26189-201ENSMUST00000179879 107 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Mir7062-201ENSMUST00000185038 66 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm8940-201ENSMUST00000212585 219 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm46190-201ENSMUST00000219650 427 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm10088-201ENSMUST00000074116 423 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm25801-201ENSMUST00000082638 106 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm22358-201ENSMUST00000082877 122 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm25755-201ENSMUST00000083396 107 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm25188-201ENSMUST00000083913 122 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Mir496a-201ENSMUST00000093627 79 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col6a1Q04857 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.85□□□□□ -1.63
Col6a1Q04857 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col6a1Q04857 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Col6a1Q04857 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col6a1Q04857 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Col6a1Q04857 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm25560-201ENSMUST00000104606 176 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm15213-201ENSMUST00000122098 216 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm23350-201ENSMUST00000158429 103 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm16378-201ENSMUST00000179168 342 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm7837-201ENSMUST00000190873 412 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm22973-201ENSMUST00000083298 191 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm25207-201ENSMUST00000093745 107 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col6a1Q04857 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.84□□□□□ -1.63
Col6a1Q04857 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
Col6a1Q04857 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.84□□□□□ -1.64
Col6a1Q04857 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a1Q04857 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm11576-201ENSMUST00000117433 417 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm15426-201ENSMUST00000117823 556 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm12564-201ENSMUST00000119860 321 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm22453-201ENSMUST00000122801 318 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm25624-201ENSMUST00000157222 275 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm22059-201ENSMUST00000157544 104 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm23865-201ENSMUST00000157723 97 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm24402-201ENSMUST00000157873 91 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms