Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm44720-201ENSMUST00000206076 260 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm22828-201ENSMUST00000083768 107 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sh3rf1Q69ZI1 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23014-201ENSMUST00000104144 130 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14890-201ENSMUST00000117660 676 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm27926-201ENSMUST00000157180 66 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm26149-201ENSMUST00000157432 108 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25486-201ENSMUST00000158726 63 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Mir6344-201ENSMUST00000183462 104 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm27690-201ENSMUST00000184596 126 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm27624-201ENSMUST00000185047 177 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm29610-201ENSMUST00000187749 453 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm46993-201ENSMUST00000220708 259 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 CT954323.1-201ENSMUST00000222774 229 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25140-201ENSMUST00000083254 140 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14304-201ENSMUST00000117272 446 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm12495-201ENSMUST00000119750 447 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14877-201ENSMUST00000119803 478 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23496-201ENSMUST00000157741 248 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm24862-201ENSMUST00000179103 79 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm23310-201ENSMUST00000179105 79 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25461-201ENSMUST00000179293 79 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm27564-201ENSMUST00000185196 96 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm29031-201ENSMUST00000185316 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm29000-201ENSMUST00000185444 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28204-201ENSMUST00000185934 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28290-201ENSMUST00000186505 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28161-201ENSMUST00000186669 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm28749-209ENSMUST00000189599 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37692-201ENSMUST00000192633 232 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm33163-201ENSMUST00000194504 614 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm18453-201ENSMUST00000208000 626 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45296-201ENSMUST00000209625 205 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm45367-201ENSMUST00000210171 347 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 AC124772.1-201ENSMUST00000221325 151 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm25755-201ENSMUST00000083396 107 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Mir452-201ENSMUST00000093629 85 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sh3rf1Q69ZI1 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sh3rf1Q69ZI1 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 157.4 ms