Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm25805-201ENSMUST00000122788 108 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 AC147545.1-201ENSMUST00000227528 108 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm23239-201ENSMUST00000083006 181 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Gm25147-201ENSMUST00000083030 105 ntBASIC5.02□□□□□ -1.61
Nubp1Q9R060 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Nubp1Q9R060 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Nubp1Q9R060 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm24886-201ENSMUST00000104384 123 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm13419-201ENSMUST00000121711 271 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm22277-201ENSMUST00000157204 277 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm22537-201ENSMUST00000158172 199 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm26171-201ENSMUST00000158422 131 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm26200-201ENSMUST00000180273 79 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm27761-201ENSMUST00000184091 131 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm37838-201ENSMUST00000194464 312 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm44657-201ENSMUST00000208568 450 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm40692-201ENSMUST00000220411 491 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm26166-201ENSMUST00000083788 107 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.01□□□□□ -1.61
Nubp1Q9R060 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Nubp1Q9R060 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm44518-201ENSMUST00000208080 4370 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm15493-201ENSMUST00000119461 528 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5□□□□□ -1.61
Nubp1Q9R060 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5□□□□□ -1.61
Nubp1Q9R060 Mir721-201ENSMUST00000200230 88 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm44594-201ENSMUST00000208982 407 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm8942-201ENSMUST00000217892 400 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm19786-201ENSMUST00000222589 580 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm24148-201ENSMUST00000082762 80 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm26495-201ENSMUST00000083152 137 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Gm25139-201ENSMUST00000083247 210 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Gm8979-201ENSMUST00000183386 7296 ntBASIC5□□□□□ -1.61
Nubp1Q9R060 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Nubp1Q9R060 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Nubp1Q9R060 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.99□□□□□ -1.61
Nubp1Q9R060 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Nubp1Q9R060 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms