Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16356-201ENSMUST00000143300 169 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm25956-201ENSMUST00000175115 217 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm22367-201ENSMUST00000178930 132 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm7909-201ENSMUST00000182688 614 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm4734-201ENSMUST00000200117 777 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm18258-201ENSMUST00000210413 542 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm45313-201ENSMUST00000210584 178 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clp1Q99LI9 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Snora23-201ENSMUST00000082517 184 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 Mir338-201ENSMUST00000083666 98 ntBASIC5.05□□□□□ -1.6
Clp1Q99LI9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Clp1Q99LI9 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm25565-201ENSMUST00000104605 105 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm16242-201ENSMUST00000117741 334 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm11600-201ENSMUST00000119592 240 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm14656-201ENSMUST00000120342 502 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm23905-201ENSMUST00000157568 109 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm24905-201ENSMUST00000158129 104 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm27510-201ENSMUST00000158214 64 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm24552-201ENSMUST00000158646 103 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm25486-201ENSMUST00000158726 63 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm24415-201ENSMUST00000180218 107 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm27999-201ENSMUST00000183539 193 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm44474-201ENSMUST00000196525 127 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm18462-201ENSMUST00000208112 417 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm45678-201ENSMUST00000210509 295 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.04□□□□□ -1.6
Clp1Q99LI9 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Clp1Q99LI9 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm14825-201ENSMUST00000113538 701 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm12646-201ENSMUST00000119144 238 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm12693-201ENSMUST00000121965 483 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm22536-201ENSMUST00000158171 134 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm25643-201ENSMUST00000158874 103 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm24085-201ENSMUST00000175172 116 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm27694-201ENSMUST00000184740 86 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Trav5d-2-201ENSMUST00000196107 275 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Trav5n-2-201ENSMUST00000197136 275 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm44650-201ENSMUST00000206929 194 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm23055-201ENSMUST00000082805 94 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.03□□□□□ -1.6
Clp1Q99LI9 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Clp1Q99LI9 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm23481-201ENSMUST00000104173 131 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm22498-201ENSMUST00000104497 86 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm13650-201ENSMUST00000117729 433 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm22637-201ENSMUST00000158144 283 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm25224-201ENSMUST00000158195 68 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm45365-201ENSMUST00000209489 256 ntBASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC5.02□□□□□ -1.61
Clp1Q99LI9 Gm23927-201ENSMUST00000082466 215 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms