Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Col9a1Q05722 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col9a1Q05722 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.43□□□□□ -1.54
Col9a1Q05722 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm37479-201ENSMUST00000194169 3841 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Col9a1Q05722 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm6079-201ENSMUST00000121356 404 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm5809-201ENSMUST00000121854 529 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Mir1907-201ENSMUST00000122509 90 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm22139-201ENSMUST00000158747 105 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm16546-201ENSMUST00000159442 355 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm7241-201ENSMUST00000159853 357 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm22775-201ENSMUST00000177630 120 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm23569-201ENSMUST00000180120 120 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Ighv1-28-201ENSMUST00000192987 351 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm43649-201ENSMUST00000196596 391 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Mir133a-2-201ENSMUST00000083526 104 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
Col9a1Q05722 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col9a1Q05722 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC5.42□□□□□ -1.54
Col9a1Q05722 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm8145-201ENSMUST00000118220 745 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm22225-201ENSMUST00000157358 278 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm22215-201ENSMUST00000157558 96 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm25066-201ENSMUST00000158145 123 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Scarna13-201ENSMUST00000158164 275 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm23855-201ENSMUST00000158377 135 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm26200-201ENSMUST00000180273 79 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm10048-201ENSMUST00000194196 372 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm29704-201ENSMUST00000196011 253 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm4644-201ENSMUST00000197587 400 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm42542-201ENSMUST00000197978 268 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm22509-201ENSMUST00000082775 107 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.41□□□□□ -1.54
Col9a1Q05722 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col9a1Q05722 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.41□□□□□ -1.54
Col9a1Q05722 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col9a1Q05722 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.4□□□□□ -1.54
Col9a1Q05722 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col9a1Q05722 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 146.1 ms