Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smarcb1Q9Z0H3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smarcb1Q9Z0H3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smarcb1Q9Z0H3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smarcb1Q9Z0H3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcb1Q9Z0H3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.79■□□□□ 0.44
Smarcb1Q9Z0H3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms