Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.49■□□□□ 0.39
Tubd1Q9R1K7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubd1Q9R1K7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubd1Q9R1K7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tubd1Q9R1K7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tubd1Q9R1K7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Gm7370-201ENSMUST00000219471 767 ntBASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tubd1Q9R1K7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tubd1Q9R1K7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Gm18958-201ENSMUST00000174258 762 ntBASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tubd1Q9R1K7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Gm43799-201ENSMUST00000201845 579 ntBASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tubd1Q9R1K7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms