Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nr2e3Q9QXZ7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Gm13559-201ENSMUST00000120476 863 ntBASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Gm43799-201ENSMUST00000201845 579 ntBASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nr2e3Q9QXZ7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nr2e3Q9QXZ7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nr2e3Q9QXZ7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nr2e3Q9QXZ7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nr2e3Q9QXZ7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nr2e3Q9QXZ7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms