Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps35Q9EQH3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps35Q9EQH3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps35Q9EQH3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps35Q9EQH3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps35Q9EQH3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Vps35Q9EQH3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps35Q9EQH3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.2■□□□□ 0.34
Vps35Q9EQH3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps35Q9EQH3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vps35Q9EQH3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vps35Q9EQH3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms