Protein–RNA interactions for Protein: Q9DBC3

Cmtr1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, mousemouse

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtr1Q9DBC3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cmtr1Q9DBC3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cmtr1Q9DBC3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cmtr1Q9DBC3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cmtr1Q9DBC3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cmtr1Q9DBC3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cmtr1Q9DBC3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cmtr1Q9DBC3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cmtr1Q9DBC3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cmtr1Q9DBC3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cmtr1Q9DBC3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cmtr1Q9DBC3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms