Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Mbd3l1Q9D9H3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Gm27502-201ENSMUST00000183495 199 ntBASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mbd3l1Q9D9H3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mbd3l1Q9D9H3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.92□□□□□ -0.02
Mbd3l1Q9D9H3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mbd3l1Q9D9H3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Gm10420-201ENSMUST00000121713 882 ntBASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Mbd3l1Q9D9H3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Mbd3l1Q9D9H3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mbd3l1Q9D9H3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mbd3l1Q9D9H3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mbd3l1Q9D9H3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Mbd3l1Q9D9H3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms