Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gtf3c6Q9D8P7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gtf3c6Q9D8P7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gtf3c6Q9D8P7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gtf3c6Q9D8P7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Gm13168-201ENSMUST00000121771 632 ntBASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gtf3c6Q9D8P7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Gm17661-201ENSMUST00000170317 270 ntBASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gtf3c6Q9D8P7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Gm8520-201ENSMUST00000186517 868 ntBASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf3c6Q9D8P7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms