Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp48Q9D361 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Snrnp48Q9D361 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Snrnp48Q9D361 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Gm21814-202ENSMUST00000203277 873 ntBASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp48Q9D361 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp48Q9D361 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Snrnp48Q9D361 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Mir5122-201ENSMUST00000175004 89 ntBASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Snrnp48Q9D361 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Gm12085-201ENSMUST00000119263 940 ntBASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.13■□□□□ 0.33
Snrnp48Q9D361 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms