Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps33aQ9D2N9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps33aQ9D2N9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps33aQ9D2N9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps33aQ9D2N9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps33aQ9D2N9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps33aQ9D2N9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps33aQ9D2N9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps33aQ9D2N9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps33aQ9D2N9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms