Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk1aQ9D132 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Gm42569-201ENSMUST00000200539 472 ntBASIC16.32■□□□□ 0.2
Upk1aQ9D132 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk1aQ9D132 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk1aQ9D132 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.3■□□□□ 0.2
Upk1aQ9D132 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.3■□□□□ 0.2
Upk1aQ9D132 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk1aQ9D132 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Gm13148-201ENSMUST00000118892 745 ntBASIC16.28■□□□□ 0.2
Upk1aQ9D132 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Upk1aQ9D132 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms