Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.34□□□□□ -0.11
Ssbp3Q9D032 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ssbp3Q9D032 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ssbp3Q9D032 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ssbp3Q9D032 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ssbp3Q9D032 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ssbp3Q9D032 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Gm7889-201ENSMUST00000185591 958 ntBASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.31□□□□□ -0.12
Ssbp3Q9D032 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssbp3Q9D032 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssbp3Q9D032 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms