Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssbp1Q9CYR0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Gm11175-201ENSMUST00000116172 543 ntBASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssbp1Q9CYR0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ssbp1Q9CYR0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ssbp1Q9CYR0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms