Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Khdc3Q9CWU5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Gm13168-201ENSMUST00000121771 632 ntBASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Gm15378-201ENSMUST00000121894 207 ntBASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Gm10698-201ENSMUST00000182663 604 ntBASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Khdc3Q9CWU5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Khdc3Q9CWU5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Khdc3Q9CWU5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Khdc3Q9CWU5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Khdc3Q9CWU5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Gm10517-202ENSMUST00000192970 758 ntBASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Khdc3Q9CWU5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms