Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc96Q9CR92 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc96Q9CR92 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc96Q9CR92 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc96Q9CR92 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc96Q9CR92 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc96Q9CR92 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gm43799-201ENSMUST00000201845 579 ntBASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc96Q9CR92 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Timm23-208ENSMUST00000226683 750 ntBASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc96Q9CR92 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc96Q9CR92 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc96Q9CR92 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc96Q9CR92 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc96Q9CR92 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.58■□□□□ 0.73
Ccdc96Q9CR92 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc96Q9CR92 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc96Q9CR92 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms