Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retreg3Q9CQV4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.29■□□□□ 0.36
Retreg3Q9CQV4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Gm7638-201ENSMUST00000121348 967 ntBASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retreg3Q9CQV4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retreg3Q9CQV4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retreg3Q9CQV4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Gm5417-201ENSMUST00000079706 384 ntBASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.26■□□□□ 0.35
Retreg3Q9CQV4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Gm10231-201ENSMUST00000181584 441 ntBASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Gm10175-202ENSMUST00000208752 441 ntBASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retreg3Q9CQV4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms