Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.04■□□□□ 0.32
Trim33Q99PP7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.04■□□□□ 0.32
Trim33Q99PP7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.04■□□□□ 0.32
Trim33Q99PP7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim33Q99PP7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim33Q99PP7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim33Q99PP7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.02■□□□□ 0.32
Trim33Q99PP7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim33Q99PP7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim33Q99PP7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim33Q99PP7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim33Q99PP7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.02■□□□□ 0.31
Trim33Q99PP7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Trim33Q99PP7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim33Q99PP7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.01■□□□□ 0.31
Trim33Q99PP7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Gm715-201ENSMUST00000117865 831 ntBASIC17.01■□□□□ 0.31
Trim33Q99PP7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim33Q99PP7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim33Q99PP7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17■□□□□ 0.31
Trim33Q99PP7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17■□□□□ 0.31
Trim33Q99PP7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim33Q99PP7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17■□□□□ 0.31
Trim33Q99PP7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms