Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nkx6-1Q99MA9 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.08■□□□□ 0.17
Nkx6-1Q99MA9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Nkx6-1Q99MA9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Nkx6-1Q99MA9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Nkx6-1Q99MA9 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nkx6-1Q99MA9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Gm18206-201ENSMUST00000207027 926 ntBASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx6-1Q99MA9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Gm18195-201ENSMUST00000207604 706 ntBASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx6-1Q99MA9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 BC021767-201ENSMUST00000126387 1716 ntBASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx6-1Q99MA9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms