Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfc4Q99J62 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfc4Q99J62 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rfc4Q99J62 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfc4Q99J62 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rfc4Q99J62 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfc4Q99J62 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rfc4Q99J62 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.79■□□□□ 0.76
Rfc4Q99J62 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Mzt1-203ENSMUST00000227948 952 ntBASIC19.79■□□□□ 0.76
Rfc4Q99J62 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc4Q99J62 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Rfc4Q99J62 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.77■□□□□ 0.76
Rfc4Q99J62 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.77■□□□□ 0.76
Rfc4Q99J62 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc4Q99J62 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfc4Q99J62 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc4Q99J62 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms